Sleep loss raises fatty acids and worsens insulin resistance, but the link is not proven
In healthy men, four nights of restricted sleep (about four hours per night) increased insulin levels and insulin resistance and decreased insulin sensitivity, while a single 24-hour total sleep deprivation raised free fatty acids and insulin after the deprivation [1]. A single night of partial sleep deprivation also increased nonesterified fatty acid levels during a clamp study and induced insulin resistance in multiple metabolic pathways [5]. These findings show that sleep loss can disturb both fat breakdown and insulin action at the same time.
However, showing that two things happen together is not the same as showing that one causes the other. None of these studies tested whether the rise in free fatty acids or fat-breakdown hormones directly produced the insulin resistance, or whether blocking that rise would prevent it. The studies measured both outcomes but did not manipulate the proposed pathway.
Body weight was controlled in some studies, but independence was not directly tested
Some sleep-restriction studies tried to keep body weight stable by controlling diet. In one study, participants ate a diet designed to maintain body weight and minimize dietary changes, yet sleep restriction still increased hepatic fatty acid oxidation [2]. That suggests sleep loss can alter fat metabolism even when weight is not changing, but the study did not test whether the resulting insulin resistance was independent of weight change.
A review of sleep curtailment and insulin resistance notes that increased release of free fatty acids and leptin has been observed even when adjusted for body weight [3]. That is consistent with the idea that sleep loss can affect metabolism through pathways other than weight gain, but it is not proof that free fatty acids or fat-breakdown hormones are the key causal factor. The review does not provide a direct test of that mechanism.
The missing experiment: blocking fat breakdown while holding weight constant
To answer the question directly, a study would need to restrict sleep, measure fat-breakdown hormones and free fatty acids, and then either block the rise in those factors or compare people whose fatty acids rise with those whose do not, all while keeping body weight stable. None of the available studies did that. The closest evidence comes from studies that controlled diet to maintain body weight [2] and from a review noting weight-adjusted associations [3], but these are indirect.
The evidence also comes from different sleep-loss protocols: one night of partial deprivation [5], four nights of restriction [1], and subchronic restriction [2]. These protocols vary in duration and severity, and the studies measured different markers. That makes it hard to compare results directly or to conclude that a single fat-breakdown pathway explains the insulin resistance.
Sources used in this answer
Sleep Debt and Insulin Resistance: What's Worse, Sleep Deprivation or Sleep Restriction?
Four nights of sleep restriction increased insulin and insulin resistance and decreased insulin sensitivity, while 24-hour total sleep deprivation raised free fatty acids and insulin in healthy men.
Subchronic sleep restriction causes tissue-specific insulin resistance
Subchronic sleep restriction with a weight-maintaining diet increased hepatic fatty acid oxidation, suggesting sleep loss can alter fat metabolism without weight change.
Interacting epidemics? Sleep curtailment, insulin resistance, and obesity
A review reports that sleep curtailment is associated with increased release of free fatty acids and leptin even when adjusted for body weight, but does not directly test whether these explain insulin resistance independently of weight change.
… role of sleep in promoting a healthy body composition: underlying mechanisms determining muscle, fat, and bone mass and their association with sleep
A review discusses sleep's role in body composition and mentions growth hormone and insulin resistance, but does not address fat-breakdown hormones, free fatty acids, or independence from body weight change.
A single night of partial sleep deprivation induces insulin resistance in multiple metabolic pathways in healthy subjects
A single night of partial sleep deprivation increased nonesterified fatty acid levels during a clamp study and induced insulin resistance in multiple metabolic pathways in healthy subjects.
